Publications

2026

Thermally Modulated Metasurface Sensor for Dynamic and Time-Resolved Isolation of Extracellular Vesicles

Kucuk, B. N., Yilmaz, E. G., Aslan, Y., Ece, E., Erdem, Ö., Gungen, M. A., Öztürk, B. Ö., Inci, F.

Advanced Materials, 2026

2026

An off-the-shelf digital microfluidic platform for integrated extracellular vesicle isolation and detection

Gungen, M. A*., Yilmaz, E. G.*, Inci, F.

Biosensors & Bioelectronics: X, 2026

2026

An Aspect Ratio–Guided Printing Angle Optimization Framework for 3D-Printed Microneedles

Ece, E., Mohamed, S., Yılmaz, E.G., Taydaş, D., Hacısomanoğlu, N., Inci, F.

MRS Communications, 2026

2026

A Wearable 3D-Printed Hollow Microneedle Device for Pressure-Driven Interstitial Fluid Collection and Testing

Hacıosmanoğlu, N., Ece, E., Inci, F.

Lab on a Chip, 2026

2026

Spatio-Temporal Confinements of Distance-Dependent Emitters for Enhancing Plasmonic Signals

Aslan, Y., Derin, E., Sagdic, K., Tabaru, T. E., Karatutlu, A., Ortaç, B., Inci, F.

ACS Applied Materials & Interfaces, 2026

2026

Decoding tumor microenvironment-derived extracellular vesicles with molecularly imprinted polymer biosensors

Saylan, Y., Atabay, M., Aydoğan, S. D., Yilmaz, E. G., Inci F.

Sensors and Actuators B: Chemical, 2026

2026

Multianalytical and Theoretical Tendency for the Clarification of the Binding of Lansoprazole and Albumin Protein

Çelik, M., Kanbes-Dindar, C., Khan, R., Rehman, F., Meraki, G. E., Mohamad, S. B., Asap, A. O., Inci, F., Bengi Uslu

ACS Omega, 2026

2026

Palladium/Alginate/Poly(NIPAM) Beads with Thermally Tunable Hydrophobic–Hydrophilic Domains for Nitroarene Reduction Reactions in Aqueous Media

Öztürk, B. Ö., Yildiz, A. M., Sari, B. S., Kucuk, B. N., Inci, F.

Organic Process Research & Development, 2026

2026

Therapeutic Microneedles for Myocardial Repair

Yürük, A., Ece, E., Akrami-Hasan-Kohal, M., Werle, F., Bencherif, S.A. #, Inci, F. #

Trends in Biotechnology, 2026

2026

Perspectives in Nanotoxicity Studies for Carbon-based Nanomaterials in 3D platform

Uzunyol, A., Inci, F.

Journal of Biochemical and Molecular Toxicology, 2026

2025

In-Field Detection of Plant Pathogens Using Three-Dimensional-Printed Microneedles and a Portable Platform

Ece, E.*, Hacıosmanoğlu, N. *, Güngen, M. A., Tatlıses, M. B., Eş, I., Hasançebi#, S., Inci, F#.

ACS Sensors, 2025

2025

Spatial Designs on Metamaterial Sensors for Enhancing Signals and Detecting Extracellular Vesicles

Derin, E., Yilmaz, E.G., Erdem, Ö., Aslan, Y., Kafadenk, A., Çelik, S., Çelik, Ü., Inci, F.

ACS Applied Materials & Interfaces, 2025

2025

Graphene oxide-cellulose composite cryogels for extracellular vesicle isolation

Saylan, Y., Altıntaş, Ö., Yilmaz, E.G., Akceoglu, G. A., Inci, F., Yılmaz, F., Denizli, A.

Microchemical Journal, 2025

2025

Unveiling Molecular Fingerprints of Bacteria on Nanoplasmonic Sensors

Erdem, Ö., Saylan, Y., Aslan, Y., Inci, F

ACS Applied Nano Materials, 2025

2025

SpAi: A Machine-learning Supported Experimental Workflow for High-throughput Spheroid Production and Analysis

Hacıosmanoğlu, N., Güngen, M. A., Yilmaz E. G., Ece, E., Uzun, A., Taşcan, A., Görmüş, B. M., Eş, I., Inci, F.

Biosensors and Bioelectronics: X, 2025

2025

A Smart Probe for Detection of Sugar Markers for Applications in Gastrointestinal Barrier Dysfunction

Inci, F. #, Resendez, A., Karaaslan, M.G., Pandrala, M., Kojouri, A.M., Ahmed, R., Ogut, M.G., Singaram, B., Malhotra, S.V. #, Demirci, U.

Biosensors and Bioelectronics, 2025

2025

Ammonium tagged Hoveyda–Grubbs catalyst immobilized on yolk/shell silica gels with a hydrophobic shell for olefin metathesis reactions

Öztürk, B. Ö., Hillik, A., Küçük, B. N., Inci, F.

Dalton Transactions, 2025

2025

Molecular Detection of Acetobacter aceti and Acetobacter pasteurianus at Different Stages of Wine Production

Mitina, I., Grajdieru, C., Sturza, R., Mitin, V., Rubtov, S., Balanuta, A., Behta, E., Inci, F., Haciosmanoglu, N., Zgardan D.

Foods, 2025

2025

Revolutionizing IBD research with on-chip models of disease modeling and drug screening

Yilmaz, E. G. *, Hacıosmanoğlu, N. *, Jordi, S. B. U. *, Yilmaz, B. #, Inci, F. #

Trends in Biotechnology, 2025

2025

Theranostic Advances and the Role of Molecular Imprinting in Disease Management

Yilmaz, E. G., Küçük, B. N., Aslan, Y., Erdem, Ö., Saylan, Y., Inci, F., Denizli, A.

Science, 2025

2025

Computational studies for the development of extracellular vesicle-based biosensors

Atabay, M., Inci, F., Saylan, Y.

Biosensors and Bioelectronics, 2025

2024

MicroMetaSense: Coupling Plasmonic Metasurfaces with Fluorescence for Enhanced Detection of Microplastics in Real-Samples

Ece, E.*, Aslan, Y.*, Hacıosmanoğlu, N.*, Inci, F.

ACS Sensors, 2024

2024

The dynamics of Brettanomyces bruxellensis contamination of wines: a case study of Moldovan micro-winery

Mitina, I. V., Grajdieru, C., Sturza, R., Mitin, V. A., Rubtov, S. L., Balanuta, A. P., Behta, E., Inci, F.

Beverages, 2024

2024

A high-precision method for manufacturing tunable solid microneedles using dicing saw and xenon difluoride-induced dry etching

Eş, I., Kafadenk, A., Inci, F.

Journal of Materials Processing Technology, 2024

2024

Dual‐Stoichiometry Copper Sulphide Nanoparticles by Laser Ablation in DMSO: Synthesis and Biomedical Applications for Enhanced Photothermal Therapy and Photoacoustic Imaging

Taylan, U., Akçimen, S., Eş, I., Küçük, B. N., Kendir, E., Çelebi, Ç., Kumru, Y., Köymen, H., Inci, F., Ortaç, B.

ChemNanoMat, 2024

2024

Modifying NiTi shape memory alloys to reduce nickel ions release through ethylenediamine plasma polymerization for biomedical applications

Durukan, B. K., Sagdic, K., Kockar, B. #, Inci, F. #

Progress in Organic Coatings, 2024

2024

A hybrid Au/Ru catalyst for sequential alkyne hydration/asymmetric transfer hydrogenation reactions

Öztürk, B.Ö., Ağlamaz D. B., Aşkun, M., Tunalı, Z., Özer, H., Sagdic, K., Inci, F.

Catalysis Science & Technology, 2024

2024

Monte Carlo simulation‐guided design for size‐tuned tumor spheroid formation in 3D printed microwells

Eş, I., Ionescu, A, M, T., Gormus, B. M., Inci, F., Marques, M. P. C., Szita, N., de la Torre, L. G.

Biotechnology Progress, 2024

2024

Shedding Light on Cellular Secrets: A Review of Advanced Optical Biosensing Techniques for Detecting Extracellular Vesicles with a Special Focus on Cancer Diagnosis

Küçük, B. N., Yilmaz, E. G., Aslan, Y., Erdem, Ö., Inci, F.

ACS Applied Biomaterials, 2024

2024

Advancing 3D printed microfluidics with computational methods for sweat analysis

Ece, E., Ölmez, K., Hacıosmanoğlu, N., Atabay, M., Inci, F.

Microchimica Acta, 2024

2023

In situ synthesis and dynamic simulation of molecularly imprinted polymeric nanoparticles on a micro-reactor system

Erdem, Ö., Eş, I., Saylan, Y., Atabay, M., Gungen, M.A., Denizli, A., Inci, F.

Nature Communications, 2023

2023

Xenon Difluoride dry etching for the microfabrication of solid microneedles as a potential strategy in transdermal drug delivery

Eş, I., Kafadenk, A., Gormus, M. B., Inci, F.

Small, 2023

2023

Label-Free Identification of Exosomes using Raman Spectroscopy and Machine Learning

Parlatan, U, Ozen, M.O., Kecoglu, I., Koyuncu, B., Torun, H., Khalafkhany, D., Loc, I., Ogut, M.G., Inci, F., Akin, D., Solaroglu, I., Ozoren, N., Unlu, M.B. #, Demirci, U. #

Small, 2023

2023

A Survey on Acetic Acid Bacteria Levels and Volatile Acidity in Several Wines of the Republic of Moldova

Zgardan D., Mitina, I., Sturza, R., Mitin, V., Rubtov, S., Grajdieru, C., Behta, E., Inci, F.

Biology and Life Sciences Forum, 2023

2023

Microneedle Technology as a New Standpoint in Agriculture: Treatment and Sensing

Ece, E., Eş, I. #, Inci, F. #

Materials Today, 2023

2023

Hydrogel-Integrated Optical Fiber Sensors and their Applications: A Comprehensive Review

Sadeque, M.S.B., Chowdhury, H.K., Rafique, M., Durmuş, M.A., Ahmed, M.K., Hasan, M.M., Erbaş, A., Sarpkaya, İ., Inci, F., Ordu, M.

Journal of Materials Chemistry C, 2023

2023

Aptamer-Based Point-of-Care Devices: Emerging Technologies and Integration of Computational Methods

Aslan, Y., Atabay, M., Chowdhury, H. K., Göktürk, I., Saylan, Y., Inci, F.

Biosensors, 2023

2023

A Sustainable Solution to Skin Diseases: Ecofriendly Transdermal Patches

Yilmaz, E. G., Ece, E., Erdem, Ö., Eş, I., Inci. F.

Pharmaceutics, 2023

2023

Microfluidics as a Ray of Hope for Microplastic Pollution

Ece, E., Hacıosmanoğlu, N., Inci. F.

Biosensors, 2023

2022

Benchmarking a Microfluidic-Based Filtration for Isolating Biological Particles

Inci, F

Langmuir, 2022

2022

Bioinspired Material-Integrated Sensors for Improving Nanoplasmonic Characteristics

Inci, F

Hacettepe Journal of Biology and Chemistry, 2022

2022

Encapsulation Of The Hoveyda-Grubbs 2nd Generation Catalyst In Magnetically Separable Alginate/Mesoporous Carbon Beads For Olefin Metathesis Reactions In Water

Tunalı, Z., Sagdic, K., Inci, F., Öztürk, B.Ö.

Reaction Chemistry & Engineering, 2022

2022

Olefin metathesis in confined spaces: the encapsulation of Hoveyda–Grubbs catalyst in peanut, square, and capsule shaped hollow silica gels.

Aşkun, M., Sagdic, K., Inci, F., Öztürk, B.Ö.

Catalysis Science & Technology, 2022

2022

Smart Materials: Rational Design In Biosystems via Artificial Intelligence

Sagdic, K., Eş, I., Sitti, M., Inci. F.

Trends in Biotechnology, 2022

2022

The Yin and Yang of Exosome Isolation Methods: Conventional Practice, Microfluidics, and Commercial KitsShirejini, S.Z., Inci, F.

Biotechnology Advances, 2022

2022

Carbon-Based Nanomaterials and Sensing Tools for Wearable Health Monitoring Devices

Erdem, O., Derin, E., Shirejini, S. Z, Sağdıç, K., Yılmaz, E. G., Yildiz, S., Akceoglu, G.A., Inci, F.

Advanced Materials Technologies, 2022

2021

Bio-Inspired Magnetic Beads for Isolation of Sperm from Heterogenous Samples in Forensic Applications

Inci, F., Karaaslan, M.G., Gupta, R., Avadhani, A., Ogut, M.G., Atila, E.E., Duncan, G., Klevan, L., and Demirci, U.

FSI Genetics, 2021

2021

Advances in Biosensor Technologies for Acute Kidney Injury

Derin, E., and Inci, F.

ACS Sensors, 2021

2021

Unifying Efforts of Medicine, Chemistry and Engineering in Biosensing Technologies to Tackle the Challenges in COVID-19 Pandemic

Erdem, O., Eş, I., Saylan, Y. and Inci, F.

Analytical Chemistry, 2021

2021

Recent Advances in Microneedle-Based Sensors for Sampling, Diagnosis and Monitoring of Chronic Diseases

Erdem, O, Es, I., Akceoglu, G.A., Saylan, Y., Inci, F.

Biosensors, 2021

2021

Smart Material-Integrated Systems for Isolation and Profiling of Rare Cancer Cells and Emboli

Sagdic, K., Inci. F.

Advanced Engineering Materials, 2021

2021

A Snapshot of Microfluidics in Point-of-Care Diagnostics: Multifaceted Integrity with Materials and Sensors

Akceoglu, G.A., Saylan, Y., Inci, F.

Advanced Materials Technologies, 2021

2020

Tunable Fano-resonant Metasurfaces on a Disposable Plastic-template for Multimodal and Multiplex Biosensing

Ahmed, R.*, Ozen, M.O. *, Karaaslan, M.G., Prator, C.A., Thanh, C., Kumar, S., Torres, L., Iyer, N., Munter, S., Southern, S., Henrich, T.J., Inci, F. #, and Demirci, U. #

Advanced Materials, 2020

2020

Entangled Nanoplasmonic Cavities for Estimating Thickness of Surface Adsorbed Layers

Kojouri, A.M., Ozen, M.O., Shahabadi, M. #, Inci, F. #, Demirci, U. #

ACS Nano, 2020

2020

Enhancing the Nanoplasmonic Signal by a Nanoparticle Sandwiching Strategy to Detect Viruses

Inci, F., Karaaslan, M.G., Kojouri, A.M., Shah, P.A., Saylan, Y., Zeng, Y., Avadhani, A., Sinclair, R., Lau, D.T-Y#, and Demirci, U. #

Applied Materials Today, 2020

2020

A Confirmatory Test for Sperm in Sexual Assault Samples using a Microfluidic-Integrated Cell Phone Imaging System

Deshmukh, S.*, Inci, F.*, Karaaslan, M.G., Ogut, M.G., Klevan, L., Duncan, G., and Demirci, U.

FSI Genetics, 2020

2020

A disposable microfluidic-integrated hand-held plasmonic platform for protein detection

Inci, F. *,#, Saylan, Y.*, Kojouri, A.M., Ogut, M.G., Denizli, A., and Demirci, U. #

Applied Materials Today, 2020

2020

Flow-induced Shear Stress Confers Resistance to Carboplatin in an Adherent Three-Dimensional Model for Ovarian Cancer: A Role for EGFR-Targeted Photoimmunotherapy Informed by Physical Stress

Nath, S., Pigula, M., Khan, A., Hanna, W., Ruhi, M. K., Dehkordy, F. M., Pushpavanam, K., Rege, K., Moore, K., Tsujita, Y., Conrad, C., Inci, F., Carmen, M. G., Franco, W., Celli, J. P., Demirci, U., Hasan, T., Huang, H-C. #, Rizvi, I#

Journal of Clinical Medicine, 2020

2020

Smart Materials-integrated Sensor Technologies for COVID-19 Diagnosis

Erdem, O.*, Derin, E.*, Sağdıç, K., Yılmaz, E. G., Inci, F.

Emergent Materials, 2020

2020

Advances in Biomimetic Systems for Molecular Recognition and Biosensing

Saylan, Y., Erdem, O., Inci, F., Denizli, A.

Biomimetics, 2020

2019

Real-time biosensing of proteins on a DVD nanoplasmonic grating

Ahmed, R.*, Ozen, M.O. *, Inci, F. *, Karaaslan, M.G., Henrich, T.J., and Demirci, U.

Proceeding of SPIE, Plasmonics in Biology and Medicine XVI, 2019

2019

Plasmonic-based Platforms for Diagnosis of Infectious Diseases at the Point-of-Care

Lia, Z., Leusteana, L., Wua, D., Inci, F., Zheng, M., Demirci, U., Wang, S.

Biotechnology Advances, 2019

2018

Hand-held Volatilome Analyzer Based on Elastically Deformable Nanofibers

Yucel, M., Akin, O., Cayoren, M., Akduman, I., Palaniappan, A., Liedberg, B., Hizal, G., Inci, F., and Yildiz, U.H.

Analytical Chemistry, 2018

2018

A novel on-chip method for differential extraction of sperm in forensic cases

Inci, F., Ozen, M.O., Saylan, Y., Miansari, M., Cimen, D., Dhara, R., Chinnasamy, T., Yuksekkaya, M., Filippini, C., Kumar, D.K., Calamak, S., Yesil, Y., Durmus, N.G., Duncan, G., Klevan, L. #, and Demirci, U. #,

Advanced Science, 2018

2017

An integrated double-filtration microfluidic device for isolation, enrichment and quantification of urinary extracellular vesicles for detection of bladder cancer

Liang, L.G., Kong, M.Q., Zhou, S., Sheng, Y.F., Wang, P., Yu, T., Gong, R.Z., Inci, F., Li, L.J., Demirci, U. #, and Wang, S. #

Scientific Reports, 2017

2017

Isolation, detection, and quantification of cancer biomarkers in HPV-associated malignancies

Inan, H., Wang, S., Inci, F., Baday, M., Zangar, R., Kesiraju, S., Anderson, K. #, Cunningham, B. #, Demirci, U#

Scientific Reports, 2017

2017

High-throughput Characterization of HIV-1 Reservoir Reactivation Using a Single-Cell-in-Droplet PCR Assay

Yucha, R., Hanhauser, E., Hobbs, K., Hogan, L., Inci, F., Shafiee, H., El Assal, R., Kiselinova, M., Bae, H., Leadabrand, K., Wang, S., Kuritzkes, D., Demirci, U. #, Henrich, T. #

EBioMedicine, 2017

2017

Guidance and Self-Sorting of Active Swimmers: 3D Periodic Arrays Increase Persistence Length of Human Sperm Selecting for the Fittest

Chinnasamy, T.*, Kingsley, J.L*, Inci, F., Turek P.J., Rosen, M.P., Behr, B., Tüzel, E. #, Demirci, U. #

Advanced Science, 2017

2017

Photonic crystals: emerging biosensors and their promise for point-of-care applications

Inan, H., Poyraz, M., Inci, F., Lifson, M.A., Baday M., Cunningham, B., Demirci, U.

Chemical Society Reviews, 2017

2016

Engineering long shelf life multilayer biologically active surfaces on microfluidic devices for point of care applications

Asghar, W. *, Yuksekkaya, M. *, Shafiee, H., Zhang, M., Ozen, M.O., Inci, F., Kocakulak, M., Demirci, U.

Scientific Reports, 2016

2016

Toxicology Study of Single-walled Carbon Nanotubes and Reduced Graphene Oxide in Human Sperm

Asghar, W., Shafiee, H., Velasco, V., Sah, V., Guo, S., El Assal, R., Inci, F., Rajagopalan, A., Jahangir, M., Anchan, R., Mutter, G., Ozkan, M., Ozkan, C., Demirci, U.

Scientific Reports, 2016

2016

Microchip-based ultrafast serodiagnostic assay for tuberculosis

Mani, V., Paleja, B., Larbi, K., Kumar, P., Tay, J., Siew, J., Inci, F., Wang, S., Chee, C., Wang, Y., Demirci, U., Libero G., Singhal, A.

Scientific Reports, 2016

2016

Advances in addressing technical challenges of point-of-care diagnostics in resource-limited settings

Wang, S., Lifson, M., Inci, F., Liang, L., Sheng, Y., Demirci, U.

Expert Review of Molecular Diagnostics, 2016

2016

Towards Artificial Tissue Models: Past, Present, and Future of 3D Bioprinting

Yildiz, A., El Assal, R., Chen, P., Guven, S., Inci, F., Demirci, U.

Biofabrication, 2016

2016

Flexible substrate-based devices for point-of-care diagnostics

Wang, S., Chinnasamy, T., Lifson, M., Inci, F., Demirci, U.

Trends in Biotechnology, 2016

2016

Advances in biosensing strategies for HIV detection, diagnosis, and therapeutic monitoring

Lifson, M.A., Ozen, M., Inci F., Wang S., Inan H., Baday M., Henrich T.J., Demirci, U.

Advanced Drug Delivery Reviews, 2016

2015

Multitarget, quantitative nanoplasmonic electrical field-enhanced resonating device (NE2RD) for diagnostics

Inci, F., Fillippini, C., Baday, M., Ozen, M.O., Calamak, S., Durmus, N.G., Wang, S., Hanhauser, E., Hobbs, K., Juillard, F., Kuang, P., Vetter, M.L., Carocci, M., Tamamoto, H., Takagi, Y., Yildiz, U.H., Akin, D., Wesemann, D., Singhal, A., Yang, P., Nibert, M., Fichorova, R., Lau, D., Henrich, T., Kaye, K., Schachter, S., Kuritzkes, D., Steinmetz, L., Gambhir, S.S., Davis, R. #, Demirci, U. #

Proceedings of the National Academy of Science, 2015

2015

Construction of P-glycoprotein Incorporated Tethered Lipid Bilayer Membranes

Inci, F., Celik, U., Turken, B., Ozer, O., Kok, F.N.

Biochemistry and Biophysics Reports, 2015

2015

Paper and flexible substrates as materials for biosensing platforms to detect multiple biotargets

Shafiee, H. *, Asghar, W. *, Inci, F. *, Yuksekkaya, M., Jahangir, M., Zhang, M., Durmus, NG., Gurkan, UA., Kuritzkes, D., Demirci. U.

Scientific Reports, 2015

2015

Portable microfluidic integrated plasmonic platform for pathogen detection

Tokel, O., Yildiz, U.H., Inci, F., Durmus, N.G., Ekiz, O.O., Turker, B., Cetin, C., Rao, S., Sridhar, K., Natarajan, N., Shafiee, H. Dana, Aykutlu, Demirci, U.

Scientific Reports, 2015

2015

Portable Lensless Wide-field Microscopy Imaging Platform based on Digital Inline Holography and Multi-Frame Pixel Super-Resolution

Sobieranski, A.C., Inci, F., Tekin, H.C., Yuksekkaya, M., Comunello, E., Cobra, D., Wangenheim, A., Demirci, U.

Light: Science & Applications, 2015

2015

Recent Advances in Micro/Nanotechnologies for Global Control of Hepatitis B Infection

Yildiz, U.H., Inci, F., Toy, M., Wang, S., Tekin, H.C., Javaid, A., Lau, D., Demirci, U.

Biotechnology Advances, 2015

2015

Advances in nanotechnology and microfluidics for human papillomavirus diagnostics

Tasoglu, S., Tekin, H.C., Inci, F., Wang, S., Johanning, F.W., Johanning, G., Colevas, D., Demirci, U.

Proceedings of the IEEE, 2015

2015

Multiscale assembly for tissue engineering and regenerative medicine

Guven, S., Chen, P., Inci, F., Tasoglu, S., Erkmen, B., Demirci, U.

Trends in Biotechnology, 2015

2015

Graphene–protein field effect biosensors: glucose sensing

Viswanathan, S., Narayanan, T., Aran, K., Fink, K., Paredes, J., Ajayan, P., Filipek, S., Miszta, P., Tekin, H.C., Inci, F., Demirci, U., Li, P., Bolotin, K., Liepmann, D., Renugopalakrishanan, V.

Materials Today, 2015

2014

Nanomechanical motion of Escherichia coli adhered to a surface

Lissandrello, C. *, Inci, F. *, Francom, M., Paul, M.R., Demirci, U., Ekinci, K.L.

Applied Physics Letters, 2014

2014

Nanostructured optical photonic crystal biosensor for HIV viral load measurement

Shafiee, H., Lidstone, E.A., Jahangir, M., Inci, F., Hanhauser, E., Henrich, T.J., Kuritzkes, D.R., Cunningham, B.T. #, Demirci, U. #

Scientific Reports, 2014

2014

Portable Digital In-line Holography Platform for Sperm Cell Visualization and Quantification

Sobieranski, A.C., Inci, F., Tekin, H.C., Comunello, E., Wangenheim, A., and Demirci, U.

IEEE Graphics, Patterns and Images, 2014

2014

Emerging technologies for monitoring drug-resistant tuberculosis at the point-of-care

Manu, V.*, Wang, S. *, Inci, F. *, Singhal, A. #, Demirci, U. #

Advanced Drug Delivery Reviews, 2014

2014

Advances in plasmonic technologies for point of care applications

Tokel, O., Inci, F., Demirci, U.

Chemical Reviews, 2014

2014

Emerging technologies for point-of-care management of HIV infection

Shafiee, H., Wang, S., Inci, F., Toy, M., Henrich, T.J., Goroff, M., Reich, M.R., Kuritzkes, D.R., Demirci, U.

Annual Review of Medicine, 2014

2013

Nanoplasmonic quantitative detection of intact viruses from unprocessed whole blood

Inci, F. *, Tokel, O. *, Wang, S., Gurkan, U. A., Tasoglu, S., Kuritzkes, D., and Demirci, U.

ACS Nano, 2013

2013

Nanoplasmonic Biosensing Platform for Multiple Pathogen Detection

Inci, F., Tokel, O., Wang, S., Gurkan, U.A., Kuritzkes, D.R., Demirci, U.

IEEE - Solid-State Sensors, Actuators and Microsystems, 2013

2013

Acute HIV Detection by Viral Lysate Impedance Spectroscopy on a Microchip

Shafiee, H., Jahangir, M., Inci, F., Wang, S., Willenbrecht, R.B.M., Giguel, F.F., Kuritzkes, D.R., Demirci, U.

IEEE - Solid-State Sensors, Actuators and Microsystems, 2013

2013

Acute On-Chip HIV Detection through label-free electrical sensing of viral nano-lysate on-chip

Shafiee, H., Jahangir. M., Inci. F., Wang. S., Willenbrecht, R., Giguel, F., Tsibris, A., Kuritzkes, D., Demirci, U.

Small, 2013

2013

Point-of-care Assays for Tuberculosis: Role of Nanotechnology/Microfluidics

Wang, S., Inci, F., Libero, G., Singhal, A., Demirci, U.

Biotechnology Advances, 2013

2012

Portable microfluidic chip for detection of Escherichia coli in produce and blood

Wang, S. *, Inci, F. *, Chaunzwa, T. L., Ramanujam, A., Vasudevan, A., Subramanian, S., Ip, A. C. F., Sridharan, B., Gurkan, U.A., and Demirci, U.

International Journal of Nanomedicine, 2012

2012

Release of magnetic nanoparticles from cell-encapsulating biodegradable Nanobiomaterials

Xu, F., Inci, F., Mullick, O., Gurkan, U. A., Sung, Y., Kavaz, D., Li, B., Denkbas, E. B., Demirci, U.

ACS Nano, 2012

2012

Well-Defined Cholesterol Polymers with pH-Dependent Lipid Membrane Switching Activity

Sevimli, S., Inci, F., Zareie, H.M., and Bulmus, V.

Biomacromolecules, 2012

2012

Efficient on-chip isolation of HIV subtypes

Wang, S., Esfahani, M., Gurkan, U. A., Inci F., Kuritzkes, D. R, Demirci, U.

Lab on a Chip, 2012

2012

Fructose-Enhanced Reduction of Bacterial Growth on Nanorough Surfaces

Durmus, N.G., Taylor, E.N., Inci, F., Kummer, K.M., Tarquinio, K.M., Webster, T.J.

International Journal of Nanomedicine, 2012

2022

Volume 3: Emerging Technologies for Diagnostics / Emerging Technologies in Biophysical Sciences: A World Scientific Reference

Inci, F., Wang, S., and Demirci, U.

World Scientific Publishing Company, 2022

2019

Biomimetic Lipid Membranes: Fundamentals, Applications, and Commercialization

Kok, F.N., Yildiz, A.A., Inci, F.

Springer Press, 2019

2026

Chapter 12: Point of Care Diagnostics for Virus Detection” in Advances in Virus Detection with Sensors (Edited by Adil Denizli)

Yilmaz, E. G., Küçük, B. N., Genc, S., Aslan, Y., Erdem, Ö., Inci, F.

Royal Society of Chemistry, 2026

2025

Artificial intelligence–assisted organ-on-chip systems” in Smart Organ-on-Chip Devices: Dynamic Microfluidic Systems for Cell Culture (Edited by Tiago Albertini Balbino, Paulo Bartolo and Letícia Charelli)

Eş, I., Ece, E., Hacıosmanoğlu, N., Güngen, M. A., Inci, F.

Elsevier, 2025

2025

“Modeling the Synapse and Neuromuscular Junction Using Organ-on-A-Chip Technology” in Handbook of Neural Engineering: A Modern Approach (Edited by Stephanie Willerth)

Yilmaz, E. G., Hacıosmanoğlu, N., Inci, F. , Ashammakhi, N.

Academic Press, 2025

2024

“Microfluidic Synthesis of Carbon-Based Nanomaterials” in Microfluidics in Pharmaceutical Sciences: Formulation, Drug Delivery, Screening, and Diagnostics (Edited by Dimitrios A. Lamprou and Edward Weaver)

Küçük, B.N., Aslan, Y., Akceoglu, G.A., Inci, F.

Springer (Copyright: American Association of Pharmaceutical Scientists (AAPS)), 2024

2024

“Microfluidic-based plasmonic nanosensors for biological and chemical threats” in Plasmonic Nanosensors for Biological and Chemical Threats (Edited by Adil Denizli)

Erdem, Ö., Yilmaz, E.G., Küçük, B.N., Inci, F., Saylan, Y.

CRC Press, 2024

2024

“Overview of Molecular Recognition and the Concept of MIPs” in Molecularly Imprinted Polymers as Artificial Antibodies for the Environmental Health (Edited by Santanu Patra and Mika Sillanpää)

Saylan, Y., Altıntaş, Ö., Erdem, Ö., Inci, F., Denizli, A.,

Springer Nature, 2024

2023

“3D Breast Cancer Model on Silk Fibroin-integrated Microfluidic Chips.”, in 3D Cell Culture Volume 2 (Edited by Zuzana Koledova)

Yilmaz, E. G., Inci, F.

Springer Nature, 2023

2022

"The role of ligand rebinding and facilitated dissociation on the characterization of dissociation rates by Surface Plasmon Resonance (SPR) and benchmarking performance metrics.", in Computational Methods for Estimating the Kinetics Parameters of Biological Systems (Edited by Quentin Vanhaelen)

Erbaş, A., Inci, F.,

Springer Nature, 2022

2021

“Deciphering Plasmonic Modality to Address Challenges in Disease Diagnostics” in Plasmonic Sensors and Their Applications (Editor: Adil Denizli),

Derin, E., Erdem, O., Inci, F.,

Wiley-VCH Verlag, 2021.

2021

“Chapter 8: Micromechanical biosensors for virus detection”, in Biosensors for Virus Detection (Edited by Adil Denizli and Yeseren Saylan)

Sağdıç, K., Erdem, O., Derin, E., Shirejini, S.Z., Aslan, Y., Celik, S., Celik, U., Inci, F.

IOP Publishing, 2021

2019

“Lipid Bilayers and Liposomes on Microfluidics Realm: Techniques and Applications” in Biomimetic Lipid Membranes: Fundamentals, Applications, and Commercialization (Edited by Fatih Inci, Ahu Arslan Yildiz, and Fatma Nese Kok)

Inci, F.

Springer Press, 2019

2019

“Biomedical Applications: Liposomes and Supported Lipid Bilayers for Diagnostics, Theranostics, Imaging, Vaccine Formulation, and Tissue Engineering” in Biomimetic Lipid Membranes: Fundamentals, Applications, and Commercialization (Edited by Fatih Inci, Ahu Arslan Yildiz, and Fatma Nese Kok),

Oncel, M.O.O., Garipcan, B., Inci, F.

Springer Press, 2019

2016

“Cell-Encapsulating Hydrogels for Biosensing.”. In Gel Handbook: Fundamentals, Properties and Applications Volume 3: Application of Hydrogels in Drug Delivery and Biosensing (Edited Utkan Demirci and Ali Khademhosseini).

Chen, P., Wang, S., Inci, F., Güven, S., Tasoglu, S., and Demirci, U.,

World Scientific Press, 2016

2016

“An integrated double-filtration device for detection of exosomes from urine for bladder cancer diagnosis” in Extracellular Vesicles: Methods and Protocols (Edited by Winston Patrick Kuo)

Liang, L., Sheng, Y., Zhao, S., Inci, F., Li, L., Demirci, U., Wang, S.,

Springer Press, 2016.

2012

“Applications of quantum dots for fluorescence imaging in biomedical research”, in Microfluidic technologies for human health (Edited by Utkan Demirci, Ali Khademhosseini, Robert Langer, Jeffrey Blander),

Wang, S. Q., Esfahani, M., Sarenac, D., Cheung, B., Vasudevan, Inci, F., and Demirci, U.

World Scientific Press, 2012

2025

Preface of special issue: Advances in point-of-care technologies and biosensing for diagnostics and treatment surveillance

Inci, F. #, Toner, M., Gürsan, A. E.,

Biosensors & Bioelectronics X, 2025 (in press)

2015

Assisted Reproductive Microchip Technologies to Improve Infertility

Inci, F., Demirci, U.

IEEE Pulse 2015 (invited)

2015

Detection of Peritonitis in Patients on Peritoneal Dialysis at Home

Wang, S., Inci, F., Demirci, U.,

IEEE Pulse 2015 (invited)

2015

“Editorial of advanced health care technologies”,

Demirci U., Wang, S., and Inci, F

Advanced Health Care Technologies, 2015

2024

A Micro-Needle Production Method

İsmail Eş, Abdullah Kafadenk, Fatih İnci

USPTO Number: 18/687,398

2023

Method of Developing Heat Control Platform for Isothermal Nucleic Acid Amplification Techniques

Fatih İnci, Murat Alp Güngen, Nedim Hacıosmanoğlu

WIPO Number: PCT/TR2023/051340

2023

A Microneedle Production Method Independent of Photolithograph

İsmail Eş, Abdullah Kafadenk, Fatih İnci

WIPO Number: PCT/TR2023/051315

2023

Determination of Species, Detection of Disease and Pathogenicity Detection Method in Eukaryotic Exosomes and Bacterial Outer Membrane Vesicles

Fatih İnci, Nedim Hacıosmanoğlu

WIPO Number: PCT/TR2023/051341

2023

Biyobelirteç Tespitinde Kullanilan Bir Cihaz Elde Etme Yöntemi

Fatih İnci, Yusuf Aslan, Kutay Sağdıç, Esma Derin

WIPO Number: PCT/TR2023/051110

2023

Bir Mikroakişkan Çip Elde Etme Yöntemi ve Yöntem ile Elde Edilen Bir Mikroakişkan Çip

Fatih İnci, Bengi Özgün Öztürk, Yeşeren Saylan İnci, Kutay Sağdıç

TURKPATENT Number: 2023/013231

2023

Bir Mikroiğne Üretim Yöntemi

İsmail Eş, Abdullah Kafadenk, Fatih İnci

WIPO Number: PCT/TR2023/050917

2023

A method of obtaining a biosensor with a biomaterial integrated metasurface

Fatih İnci, Esma Derin

WIPO Number: PCT/TR2023/050943

2023

Synthesis method of polymeric nanoparticle molecularly imprinted by microfluidic system

Fatih İnci, Özgecan Erdem, İsmail Eş

WIPO Number: PCT/TR2023/050924

2022

Mikroakışkan Sistem İle Moleküler Baskılanmış Polimerik Nanopartikül Sentez Yöntemi

Özgecan Erdem, İsmail Eş, Fatih İnci

TURKPATENT Number: 2022/013899

2022

Biyomalzeme Entegre Edilmiş Metayüzeye Sahip Bir Biyosensör Elde Etme Yöntemi

TURKPATENT Number: 2022/014113 B

2022

Ökaryötik Eksozomlar ve Bakteriyel Dış Membran Vesiküllerinde Tür Tayini, Hastalik Tespiti ve Patojenite Tespit Yöntemi

Fatih İnci, Nedim Hacıosmanoğlu

TURKPATENT Number: 2022/021664

2022

İzotermal Nükleik Asit Amplifikasyon Teknikleri için Isı Kontrol Mekanizması Geliştirilmesi Yöntemi

Fatih İnci, Murat Alp Güngen, Nedim Hacıosmanoğlu

TURKPATENT Number: 2022/021549

2022

Biyobelirteç Tespitinde Kullanilan Bir Cihaz Elde Etme Yöntemi

Fatih İnci, Yusuf Aslan, Kutay Sağdıç, Esma Derin

TURKPATENT Number: 2022/015469

2022

Bir Mikroiğne Üretim Yöntemi

İsmail Eş, Abdullah Kafadenk, Fatih İnci

TURKPATENT Number: 2022/013871

2022

Fotolitografiden Bağimsiz Bir Mikroiğne Üretim Yöntemi

İsmail Eş, Abdullah Kafadenk, Fatih İnci

TURKPATENT Number: 2022/017275

2020

Optical method for measuring thickness of surface-adsorbed layers with nanometric length-scale

Amideddin Mataji-Kojouri, Mehmet Ozgun Ozen, Mahmoud Shahabadi, Fatih Inci, Utkan Demirci

US63/045,495 (Provisional)

2019

Plastic-Template Metasurfaces for Multi-Modal and Multiplex Biosensing

Rajib Ahmed, Mehmet Ozgun Ozen, Sarka Southern, Timothy J Henrich, Fatih Inci, Utkan Demirci

US62/980,595 (Provisional)

2016

Imaging systems and methods of using the same

Antonio Carlos Sobieranski, Utkan Demirci, Huseyin Cumhur Tekin, Fatih Inci

US20180033128A1

2015

Quantitative Nanoplasmonic Platform for Multiple Targets

Utkan Demirci, Fatih Inci

Stanford University Docket Number: 15-315

2015

Systems and Methods for Determining Probative Samples and Isolation and Quantitation of Cells

Leonard Klevan, Utkan Demirci, Fatih Inci

WO2016054295A1 (licensed to DxNow, Inc., and then, acquired by CooperSurgical)

2015

Systems and Methods for Determining Probative Samples and Isolation and Quantitation of Cells

Leonard Klevan, Utkan Demirci, Fatih Inci

US20170354972A1 (licensed to DxNow, Inc., and then, acquired by CooperSurgical)

2015

Systems and Methods for Determining Probative Samples and Isolation and Quantitation of Cells

Leonard Klevan, Utkan Demirci, Fatih Inci

PCT/US15/53370 (licensed to DxNow, Inc., and then, acquired by CooperSurgical)

2015

Imaging systems and methods of using the same

Antonio Carlos Sobieranski, Utkan Demirci, Huseyin Cumhur Tekin, Fatih Inci

WO2016138255A1

2013

Methods for bacteria detection, monitoring of antibiotic agents, and energy harvesting using micromechanical devices

BWH 22611 disclosed by Brigham and Women’s Hospital

2013

Detection, capture and quantification of biological moieties from unprocessed bodily fluids using nanoplasmonic platform

Utkan Demirci, Fatih Inci

WO2014008363A1

2013

Detection, capture and quantification of biological moieties from unprocessed bodily fluids using nanoplasmonic platform

Utkan Demirci, Fatih Inci

US20150160218A1

2013

Detection, capture and quantification of biological moieties from unprocessed bodily fluids using nanoplasmonic platform

Utkan Demirci, Fatih Inci

EP2870461B1

2012

Controlled viable release of selectively captured label-free cells in microchannels

Umut Atakan Gurkan, Fatih Inci, Utkan Demirci

BWH21303 disclosed by Brigham and Women’s Hospital

2017

CSI-Q™ (Chip-Based Sperm Identification and Quantitation) Cartridges

2017

NGDE™ (Next-Generation Differential Extraction) System